Toolboxes

AAL - Anatomical Automatic Labeling 1.0 (SPM12), v1 (SPM8), vbeta2 (SPM5) & vbeta1 (SPM2)

Anatomy 2.2 (SPM8, SPM5 & SPM2)

ArtRepair v5b3 (SPM12) & v4 (SPM8, SPM5 & SPM2)

Brain Connectivity Toolbox (BCT) 2011-03-27 (Matlab toolbox)

Brainnetome Atlas Viewer V1.0 (Matlab toolbox; start with BN_atlas from Matlab-promt; requires Matlab R2009b or later)

BrainNet Viewer 1.51 (Matlab toolbox)

BWT - BrainWavelet Toolbox v1.1 fMRI Edition (Matlab toolbox)

bspmview 20160310 (SPM12 & SPM8)

CAT - Computational Anatomy Toolbox CAT12 r1113 (SPM12)

Clinical Toolbox 8/2014 (SPM8)

DPABI (Data Processing & Analysis of Brain Imaging) V1.2_141101, includes DPARSF (Data Processing Assistant for Resting-State fMRI) V3.1_141101 (SPM8)

CONN functional connectivity toolbox v.17.c (SPM12 & SPM8)

Distance 3beta (SPM5 & SPM2)

Easy_ROI Jul 6 2011 (SPM8, SPM5 & SPM2)

Functional Connectivity Toolbox (FCT) 2011-07-16 (Matlab toolbox)

Functional localization in fMRI studies of language http://web.mit.edu/evelina9/www/funcloc.html

Graph Theory GLM (GTG) MATLAB Toolbox beta 0.39 (Matlab toolbox)

GraphVar beta v_0.60 (Matlab toolbox)

GroupICAT v4.0a (includes GIFT (Group ICA/IVA of fMRI Toolbox) v3.0a) & Updates (Oct 22, 2015)

Hemodynamic Response Estimation Toolbox 2.0 (SPM8, SPM5 & SPM2)

LI-toolbox 1.3 (SPM12 & SPM8)

Logtransform (SPM12 & SPM8)

mask_explorer 2.10 (SPM12, SPM8; requires Matlab R2013a or higher)

MarsBaR 0.44 (SPM12, SPM8, SPM5 & SPM2)

Motion fingerprint 1.5.2 (SPM12 & SPM8)

MRTool v1.4.1 (SPM12)

Multivariate and Repeated Measures (MRM) 0.6 (Matlab toolbox; requires Matlab R2013a or higher)

Pattern Recognition for Neuroimaging Toolbox (PRoNTo) v1.1_r740 + bugfix (SPM8)

rfxplot Revision 52 (SPM8 & SPM5)

RobustWLS 4.0 (SPM12) & 3.1 (SPM8) & 2.1 (SPM5 & SPM2)

RSAtoolbox (Matlab toolbox)

SnPM 13.1.03 16-Dec-2015 (SPM12 & SPM8)

spmScripts 30JUN2016

TDT – The Decoding Toolbox 3.52 (SPM8, SPM5 & SPM2)

TFCE - threshold-free cluster enhancement r119 (SPM12)

TSDiffAna (Analyze Time Series) 2014-10-16 (SPM12) & r691 (SPM8)

Variability Toolbox 0.1 (SPM12 & SPM8)

VBM - Voxel-Based Morphometry VBM8 r445 (SPM8), VBM5 1.19 (SPM5) & VBM2 1.09 (SPM2)

• for SPM12, this toolbox was renamed to CAT (Computational Anatomy Toolbox)

Volumes 2015-02-09 (SPM12) & r720 (SPM8) & r630 (SPM5)

WFU PickAtlas 3.0.3 with Update for Matlab 2011b (SPM8) & 2.4 (SPM5 & SPM2)

xjView 9.0 (14 Nov 2016; SPM12, SPM8, SPM5 & SPM2)

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